Survival-associated meQTLs across different cancer types


We identified 23,432 meQTLs associated with patient overall survival across different cancer types at FDR < 0.05.


e.g., "BLCA"
e.g., "rs11600543"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
log-rank test p-value
Sample size
Median survival time AA
Median survival time Aa
Median survival time aa
Dispaly
KIRP rs75047678 chr17:80785954 C/A 2.18E-9 284 26.2 25.55 16.4 KM Plot
KIRP rs75098130 chr7:53217124 C/T 9.27E-6 284 25.7 25.37 10.97 KM Plot
KIRP rs7515178 chr1:205084120 G/A 7.28E-5 288 23.02 28.03 21.9 KM Plot
KIRP rs75163917 chr16:90081032 T/G 1.26E-7 285 24.73 34.82 10.7 KM Plot
KIRP rs75171064 chr7:20702562 T/G 6.74E-6 288 25.93 23.1 11.2 KM Plot
KIRP rs75299132 chr17:80803334 C/G 9.39E-9 282 26.28 22.8 16.4 KM Plot
KIRP rs7530801 chr1:84533343 A/G 1.9E-5 283 13.63 26.73 25.93 KM Plot
KIRP rs75325816 chr10:74950538 A/C 1.14E-14 287 26.37 23.63 5.6 KM Plot
KIRP rs75326860 chr17:80834695 C/T 1.24E-5 283 25.63 26.42 16.77 KM Plot
KIRP rs7534248 chr1:231554531 C/T 0.000176 285 24.8 29.77 19.9 KM Plot
KIRP rs75353400 chr7:20671281 A/T 2.29E-5 288 25.82 22.57 11.2 KM Plot
KIRP rs75366006 chr6:148666102 G/T 9.7E-5 286 26.4 18.67 18.2 KM Plot
KIRP rs75382629 chr21:44246372 A/G 0.000169 288 25.53 43.53 13.07 KM Plot
KIRP rs75383904 chr10:43390727 C/T 5.62E-6 287 25.7 24.57 16.12 KM Plot
KIRP rs75405807 chr10:43537635 C/T 4.17E-5 285 25.63 25.5 11.43 KM Plot